Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Gm22175-201ENSMUST00000175007 78 ntBASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Gm24447-201ENSMUST00000083977 338 ntBASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh1F7BJK1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm27680-201ENSMUST00000184192 160 ntBASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm19931-201ENSMUST00000198920 368 ntBASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Gm5867-201ENSMUST00000063197 592 ntBASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh1F7BJK1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Pck2-205ENSMUST00000226352 2784 ntBASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdh1F7BJK1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms