Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TprF6ZDS4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TprF6ZDS4 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TprF6ZDS4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TprF6ZDS4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TprF6ZDS4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TprF6ZDS4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TprF6ZDS4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TprF6ZDS4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
TprF6ZDS4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm24830-201ENSMUST00000102024 166 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm25890-201ENSMUST00000177643 165 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm22614-201ENSMUST00000178300 165 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm22042-201ENSMUST00000082989 165 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm26232-201ENSMUST00000083360 166 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm24136-201ENSMUST00000083374 165 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm26110-201ENSMUST00000083971 165 ntBASIC12.12□□□□□ -0.47
TprF6ZDS4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TprF6ZDS4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TprF6ZDS4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Gm23200-201ENSMUST00000104379 132 ntBASIC12.11□□□□□ -0.47
TprF6ZDS4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.11□□□□□ -0.47
TprF6ZDS4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.11□□□□□ -0.47
TprF6ZDS4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.11□□□□□ -0.47
TprF6ZDS4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.11□□□□□ -0.47
TprF6ZDS4 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.11□□□□□ -0.47
TprF6ZDS4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TprF6ZDS4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TprF6ZDS4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TprF6ZDS4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
TprF6ZDS4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TprF6ZDS4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms