Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc188F6WEU2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Mir671-201ENSMUST00000102432 98 ntBASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gm11246-201ENSMUST00000120880 345 ntBASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gm43752-201ENSMUST00000198475 697 ntBASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc188F6WEU2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm12990-201ENSMUST00000120372 468 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm13182-201ENSMUST00000122241 312 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm8584-201ENSMUST00000171982 758 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm5733-201ENSMUST00000190232 939 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm19187-201ENSMUST00000206781 892 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.17□□□□□ -0.3
Ccdc188F6WEU2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms