Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Mir1956-201ENSMUST00000157748 65 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm18204-201ENSMUST00000209835 793 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm5904-201ENSMUST00000210286 865 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Gm25201-201ENSMUST00000083093 170 ntBASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sptbn4E9PX29 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm270-201ENSMUST00000223010 976 ntBASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm13022-201ENSMUST00000121181 285 ntBASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sptbn4E9PX29 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sptbn4E9PX29 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sptbn4E9PX29 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sptbn4E9PX29 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms