Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Paupar-201ENSMUST00000194826 3482 ntBASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm28043E0CXC2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Syt7-204ENSMUST00000223586 1344 ntBASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Gm15321-201ENSMUST00000121290 288 ntBASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm28043E0CXC2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.22□□□□□ -0.29
Gm28043E0CXC2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.22□□□□□ -0.29
Gm28043E0CXC2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm28043E0CXC2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Gm18905-201ENSMUST00000205454 928 ntBASIC13.21□□□□□ -0.29
Gm28043E0CXC2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm28043E0CXC2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms