Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.8□□□□□ -0.52
Shank1D3YZU1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.8□□□□□ -0.52
Shank1D3YZU1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.8□□□□□ -0.52
Shank1D3YZU1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Shank1D3YZU1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm13461-201ENSMUST00000120980 662 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm15276-201ENSMUST00000145953 498 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm8738-201ENSMUST00000172606 329 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm18212-201ENSMUST00000211678 889 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm19208-201ENSMUST00000213861 912 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm23200-201ENSMUST00000104379 132 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm6447-201ENSMUST00000118905 835 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gm18584-201ENSMUST00000203098 964 ntBASIC11.79□□□□□ -0.52
Shank1D3YZU1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Shank1D3YZU1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms