Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.84□□□□□ -0.35
Clip3B9EHT4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clip3B9EHT4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.83□□□□□ -0.35
Clip3B9EHT4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Gm38671-201ENSMUST00000200573 130 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 Gm18062-201ENSMUST00000208020 547 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 Gm18055-201ENSMUST00000208254 547 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 Gm6983-201ENSMUST00000214912 628 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clip3B9EHT4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.83□□□□□ -0.36
Clip3B9EHT4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clip3B9EHT4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.82□□□□□ -0.36
Clip3B9EHT4 Gm13829-201ENSMUST00000119600 138 ntBASIC12.82□□□□□ -0.36
Clip3B9EHT4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.82□□□□□ -0.36
Clip3B9EHT4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Gm2495-201ENSMUST00000191160 466 ntBASIC12.82□□□□□ -0.36
Clip3B9EHT4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Gm17794-201ENSMUST00000220252 955 ntBASIC12.82□□□□□ -0.36
Clip3B9EHT4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.82□□□□□ -0.36
Clip3B9EHT4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.82□□□□□ -0.36
Clip3B9EHT4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Clip3B9EHT4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip3B9EHT4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip3B9EHT4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip3B9EHT4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Clip3B9EHT4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip3B9EHT4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip3B9EHT4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.81□□□□□ -0.36
Clip3B9EHT4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Clip3B9EHT4 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms