Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn7aB1AYL1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Gm14263-201ENSMUST00000117955 746 ntBASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Gm8285-201ENSMUST00000208293 759 ntBASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn7aB1AYL1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Gm7848-201ENSMUST00000210739 718 ntBASIC16.59■□□□□ 0.25
Scn7aB1AYL1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 H2-Q3-201ENSMUST00000172583 608 ntBASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn7aB1AYL1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn7aB1AYL1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.58■□□□□ 0.25
Scn7aB1AYL1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn7aB1AYL1 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.58■□□□□ 0.25
Scn7aB1AYL1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
Scn7aB1AYL1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn7aB1AYL1 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.58■□□□□ 0.25
Scn7aB1AYL1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Scn7aB1AYL1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.58■□□□□ 0.24
Scn7aB1AYL1 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Mir1943-201ENSMUST00000158276 73 ntBASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Gm17827-201ENSMUST00000211825 742 ntBASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
Scn7aB1AYL1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Scn7aB1AYL1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Scn7aB1AYL1 Gm11989-201ENSMUST00000117240 672 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms