Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col4a6B1AVK5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Gm14644-201ENSMUST00000116671 647 ntBASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Gm11667-201ENSMUST00000119828 486 ntBASIC13.27□□□□□ -0.29
Col4a6B1AVK5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.27□□□□□ -0.29
Col4a6B1AVK5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Gm11941-201ENSMUST00000119904 610 ntBASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Gm8566-201ENSMUST00000120174 465 ntBASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 AY036118-201ENSMUST00000200021 923 ntBASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Gm10076-201ENSMUST00000073238 384 ntBASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col4a6B1AVK5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Gm11450-201ENSMUST00000121144 333 ntBASIC13.25□□□□□ -0.29
Col4a6B1AVK5 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Gm23119-201ENSMUST00000158610 140 ntBASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Mir6546-201ENSMUST00000184460 62 ntBASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.25□□□□□ -0.29
Col4a6B1AVK5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.24□□□□□ -0.29
Col4a6B1AVK5 Gm43962-201ENSMUST00000203898 190 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms