Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.12□□□□□ -0.63
Col6a4A2AX52 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm5523-201ENSMUST00000180415 997 ntBASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.12□□□□□ -0.63
Col6a4A2AX52 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.11□□□□□ -0.63
Col6a4A2AX52 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a4A2AX52 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm12363-201ENSMUST00000122250 668 ntBASIC11.1□□□□□ -0.63
Col6a4A2AX52 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.1□□□□□ -0.63
Col6a4A2AX52 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm3508-201ENSMUST00000186012 792 ntBASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm37042-201ENSMUST00000193816 581 ntBASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm5781-201ENSMUST00000219792 443 ntBASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Col6a4A2AX52 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a4A2AX52 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms