Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb1A2AQ07 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb1A2AQ07 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tubb1A2AQ07 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tubb1A2AQ07 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tubb1A2AQ07 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.49□□□□□ -0.25
Tubb1A2AQ07 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm12859-201ENSMUST00000117834 427 ntBASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm6983-201ENSMUST00000214912 628 ntBASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tubb1A2AQ07 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Gm14350-201ENSMUST00000116642 640 ntBASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Gm7488-201ENSMUST00000117148 684 ntBASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Gm11978-201ENSMUST00000122315 466 ntBASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Gm27437-201ENSMUST00000183429 107 ntBASIC13.48□□□□□ -0.25
Tubb1A2AQ07 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tubb1A2AQ07 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Gm5687-201ENSMUST00000118252 640 ntBASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Gm37917-201ENSMUST00000194711 392 ntBASIC13.47□□□□□ -0.25
Tubb1A2AQ07 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Gm44397-201ENSMUST00000195950 113 ntBASIC13.47□□□□□ -0.25
Tubb1A2AQ07 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms