Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav12d-1A0N8R0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm24513-201ENSMUST00000174964 138 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm17795-201ENSMUST00000214505 757 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Chchd1-203ENSMUST00000224633 557 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.6□□□□□ -0.71
Trav12d-1A0N8R0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Gm27397-201ENSMUST00000184997 107 ntBASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Gm44771-201ENSMUST00000206975 626 ntBASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav12d-1A0N8R0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms