Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.06■□□□□ 0
Ccdc112A0AUP1 Mir6956-201ENSMUST00000183598 62 ntBASIC15.06■□□□□ 0
Ccdc112A0AUP1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.06■□□□□ 0
Ccdc112A0AUP1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.06■□□□□ 0
Ccdc112A0AUP1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Ccdc112A0AUP1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc112A0AUP1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccdc112A0AUP1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ccdc112A0AUP1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc112A0AUP1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc112A0AUP1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ccdc112A0AUP1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Mir7684-201ENSMUST00000183858 60 ntBASIC15.05■□□□□ -0
Ccdc112A0AUP1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.05■□□□□ -0
Ccdc112A0AUP1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.05■□□□□ -0
Ccdc112A0AUP1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.05■□□□□ -0
Ccdc112A0AUP1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.05■□□□□ -0
Ccdc112A0AUP1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc112A0AUP1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.04■□□□□ -0
Ccdc112A0AUP1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.04■□□□□ -0
Ccdc112A0AUP1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gm14719-201ENSMUST00000121891 340 ntBASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gm24694-201ENSMUST00000180054 110 ntBASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gm27663-201ENSMUST00000184839 110 ntBASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.04■□□□□ -0
Ccdc112A0AUP1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.04■□□□□ -0
Ccdc112A0AUP1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.04■□□□□ -0
Ccdc112A0AUP1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc112A0AUP1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc112A0AUP1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc112A0AUP1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms