Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Gm3880A0A1B0GSB3 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm13135-201ENSMUST00000117628 3121 ntBASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm9347-201ENSMUST00000211473 1607 ntBASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm26039-201ENSMUST00000158152 144 ntBASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm18101-201ENSMUST00000215769 548 ntBASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 AC122024.2-201ENSMUST00000220086 871 ntBASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm43937-201ENSMUST00000204640 3122 ntBASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Gm3880A0A1B0GSB3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms