Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav6n-6A0A075B6B2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm25927-201ENSMUST00000175058 117 ntBASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm16476-201ENSMUST00000221544 139 ntBASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav6n-6A0A075B6B2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 BC001981-202ENSMUST00000191393 1545 ntBASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav6n-6A0A075B6B2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms