Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav8-1A0A075B641 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gm11452-201ENSMUST00000122376 690 ntBASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav8-1A0A075B641 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Gm25927-201ENSMUST00000175058 117 ntBASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav8-1A0A075B641 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms