Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.59■■□□□ 1.05
Msh5Q9QUM7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Msh5Q9QUM7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.58■■□□□ 1.05
Msh5Q9QUM7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
Msh5Q9QUM7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Msh5Q9QUM7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Msh5Q9QUM7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Msh5Q9QUM7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Msh5Q9QUM7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.58■■□□□ 1.05
Msh5Q9QUM7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Msh5Q9QUM7 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.57■■□□□ 1.04
Msh5Q9QUM7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh5Q9QUM7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh5Q9QUM7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.57■■□□□ 1.04
Msh5Q9QUM7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Msh5Q9QUM7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Msh5Q9QUM7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh5Q9QUM7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Msh5Q9QUM7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Msh5Q9QUM7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Msh5Q9QUM7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Msh5Q9QUM7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.56■■□□□ 1.04
Msh5Q9QUM7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Msh5Q9QUM7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Msh5Q9QUM7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Msh5Q9QUM7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Msh5Q9QUM7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Msh5Q9QUM7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Msh5Q9QUM7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Msh5Q9QUM7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Msh5Q9QUM7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Msh5Q9QUM7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Msh5Q9QUM7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Msh5Q9QUM7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Msh5Q9QUM7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Msh5Q9QUM7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.52■■□□□ 1.04
Msh5Q9QUM7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Msh5Q9QUM7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.52■■□□□ 1.04
Msh5Q9QUM7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Msh5Q9QUM7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Msh5Q9QUM7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Msh5Q9QUM7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Msh5Q9QUM7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Msh5Q9QUM7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh5Q9QUM7 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.5■■□□□ 1.03
Msh5Q9QUM7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.5■■□□□ 1.03
Msh5Q9QUM7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Msh5Q9QUM7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Msh5Q9QUM7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Msh5Q9QUM7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Msh5Q9QUM7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Msh5Q9QUM7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh5Q9QUM7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh5Q9QUM7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Msh5Q9QUM7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Msh5Q9QUM7 Notumos-201ENSMUST00000151998 2659 ntBASIC21.49■■□□□ 1.03
Msh5Q9QUM7 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.48■■□□□ 1.03
Msh5Q9QUM7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh5Q9QUM7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Msh5Q9QUM7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.48■■□□□ 1.03
Msh5Q9QUM7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Msh5Q9QUM7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Msh5Q9QUM7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Msh5Q9QUM7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh5Q9QUM7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh5Q9QUM7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Msh5Q9QUM7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Msh5Q9QUM7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Msh5Q9QUM7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Msh5Q9QUM7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Msh5Q9QUM7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Msh5Q9QUM7 Gm10420-201ENSMUST00000121713 882 ntBASIC21.45■■□□□ 1.02
Msh5Q9QUM7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Msh5Q9QUM7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Msh5Q9QUM7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Msh5Q9QUM7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Msh5Q9QUM7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh5Q9QUM7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Msh5Q9QUM7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh5Q9QUM7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh5Q9QUM7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Msh5Q9QUM7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms