Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim42Q9D2H5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.16■□□□□ 0.98
Trim42Q9D2H5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trim42Q9D2H5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim42Q9D2H5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim42Q9D2H5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim42Q9D2H5 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.15■□□□□ 0.98
Trim42Q9D2H5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim42Q9D2H5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim42Q9D2H5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim42Q9D2H5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.14■□□□□ 0.97
Trim42Q9D2H5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.14■□□□□ 0.97
Trim42Q9D2H5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Trim42Q9D2H5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim42Q9D2H5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim42Q9D2H5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim42Q9D2H5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim42Q9D2H5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim42Q9D2H5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim42Q9D2H5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim42Q9D2H5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim42Q9D2H5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim42Q9D2H5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim42Q9D2H5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim42Q9D2H5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.11■□□□□ 0.97
Trim42Q9D2H5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim42Q9D2H5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.1■□□□□ 0.97
Trim42Q9D2H5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim42Q9D2H5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Trim42Q9D2H5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim42Q9D2H5 Terc-201ENSMUST00000082862 423 ntBASIC21.1■□□□□ 0.97
Trim42Q9D2H5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim42Q9D2H5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.1■□□□□ 0.97
Trim42Q9D2H5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim42Q9D2H5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trim42Q9D2H5 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.08■□□□□ 0.97
Trim42Q9D2H5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trim42Q9D2H5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim42Q9D2H5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
Trim42Q9D2H5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim42Q9D2H5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim42Q9D2H5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim42Q9D2H5 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.06■□□□□ 0.96
Trim42Q9D2H5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim42Q9D2H5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim42Q9D2H5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Mir3960-201ENSMUST00000198213 73 ntBASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim42Q9D2H5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim42Q9D2H5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim42Q9D2H5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim42Q9D2H5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim42Q9D2H5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim42Q9D2H5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim42Q9D2H5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.04■□□□□ 0.96
Trim42Q9D2H5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim42Q9D2H5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trim42Q9D2H5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim42Q9D2H5 Gm6821-201ENSMUST00000107540 542 ntBASIC21.03■□□□□ 0.96
Trim42Q9D2H5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.03■□□□□ 0.96
Trim42Q9D2H5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim42Q9D2H5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim42Q9D2H5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim42Q9D2H5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms