Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
Chaf1bQ9D0N7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chaf1bQ9D0N7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chaf1bQ9D0N7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chaf1bQ9D0N7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.95■□□□□ 0.78
Chaf1bQ9D0N7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chaf1bQ9D0N7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chaf1bQ9D0N7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chaf1bQ9D0N7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.94■□□□□ 0.78
Chaf1bQ9D0N7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Chaf1bQ9D0N7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chaf1bQ9D0N7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chaf1bQ9D0N7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1bQ9D0N7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.93■□□□□ 0.78
Chaf1bQ9D0N7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chaf1bQ9D0N7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chaf1bQ9D0N7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.93■□□□□ 0.78
Chaf1bQ9D0N7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chaf1bQ9D0N7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1bQ9D0N7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chaf1bQ9D0N7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chaf1bQ9D0N7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chaf1bQ9D0N7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1bQ9D0N7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1bQ9D0N7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1bQ9D0N7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chaf1bQ9D0N7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chaf1bQ9D0N7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1bQ9D0N7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chaf1bQ9D0N7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chaf1bQ9D0N7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.89■□□□□ 0.77
Chaf1bQ9D0N7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.89■□□□□ 0.77
Chaf1bQ9D0N7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chaf1bQ9D0N7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1bQ9D0N7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chaf1bQ9D0N7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Chaf1bQ9D0N7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1bQ9D0N7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.88■□□□□ 0.77
Chaf1bQ9D0N7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1bQ9D0N7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chaf1bQ9D0N7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Chaf1bQ9D0N7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1bQ9D0N7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Chaf1bQ9D0N7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1bQ9D0N7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Chaf1bQ9D0N7 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.87■□□□□ 0.77
Chaf1bQ9D0N7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1bQ9D0N7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chaf1bQ9D0N7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1bQ9D0N7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1bQ9D0N7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1bQ9D0N7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chaf1bQ9D0N7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chaf1bQ9D0N7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Chaf1bQ9D0N7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.85■□□□□ 0.77
Chaf1bQ9D0N7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.85■□□□□ 0.77
Chaf1bQ9D0N7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chaf1bQ9D0N7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chaf1bQ9D0N7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.85■□□□□ 0.77
Chaf1bQ9D0N7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chaf1bQ9D0N7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chaf1bQ9D0N7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chaf1bQ9D0N7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chaf1bQ9D0N7 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.84■□□□□ 0.77
Chaf1bQ9D0N7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chaf1bQ9D0N7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chaf1bQ9D0N7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chaf1bQ9D0N7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chaf1bQ9D0N7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chaf1bQ9D0N7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Chaf1bQ9D0N7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chaf1bQ9D0N7 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.82■□□□□ 0.76
Chaf1bQ9D0N7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.82■□□□□ 0.76
Chaf1bQ9D0N7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chaf1bQ9D0N7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chaf1bQ9D0N7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chaf1bQ9D0N7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chaf1bQ9D0N7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chaf1bQ9D0N7 Notumos-201ENSMUST00000151998 2659 ntBASIC19.81■□□□□ 0.76
Chaf1bQ9D0N7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chaf1bQ9D0N7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chaf1bQ9D0N7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chaf1bQ9D0N7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chaf1bQ9D0N7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms