Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Khdc3Q9CWU5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc3Q9CWU5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.39■□□□□ 0.85
Khdc3Q9CWU5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc3Q9CWU5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc3Q9CWU5 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.39■□□□□ 0.85
Khdc3Q9CWU5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Khdc3Q9CWU5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc3Q9CWU5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc3Q9CWU5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.37■□□□□ 0.85
Khdc3Q9CWU5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc3Q9CWU5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc3Q9CWU5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Khdc3Q9CWU5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Khdc3Q9CWU5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Khdc3Q9CWU5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Khdc3Q9CWU5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Khdc3Q9CWU5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Khdc3Q9CWU5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc3Q9CWU5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc3Q9CWU5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Khdc3Q9CWU5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc3Q9CWU5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc3Q9CWU5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.33■□□□□ 0.84
Khdc3Q9CWU5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.33■□□□□ 0.84
Khdc3Q9CWU5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Khdc3Q9CWU5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Khdc3Q9CWU5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Khdc3Q9CWU5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Khdc3Q9CWU5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Khdc3Q9CWU5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Khdc3Q9CWU5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Khdc3Q9CWU5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc3Q9CWU5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Khdc3Q9CWU5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc3Q9CWU5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc3Q9CWU5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc3Q9CWU5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc3Q9CWU5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc3Q9CWU5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc3Q9CWU5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Khdc3Q9CWU5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Khdc3Q9CWU5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Khdc3Q9CWU5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.28■□□□□ 0.84
Khdc3Q9CWU5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Khdc3Q9CWU5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms