Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cnot11Q9CWN7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnot11Q9CWN7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Cnot11Q9CWN7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cnot11Q9CWN7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnot11Q9CWN7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnot11Q9CWN7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cnot11Q9CWN7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnot11Q9CWN7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnot11Q9CWN7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cnot11Q9CWN7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cnot11Q9CWN7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cnot11Q9CWN7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cnot11Q9CWN7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnot11Q9CWN7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnot11Q9CWN7 Gm10420-201ENSMUST00000121713 882 ntBASIC20.64■□□□□ 0.89
Cnot11Q9CWN7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnot11Q9CWN7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnot11Q9CWN7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cnot11Q9CWN7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot11Q9CWN7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot11Q9CWN7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot11Q9CWN7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot11Q9CWN7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.63■□□□□ 0.89
Cnot11Q9CWN7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot11Q9CWN7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.63■□□□□ 0.89
Cnot11Q9CWN7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnot11Q9CWN7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnot11Q9CWN7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cnot11Q9CWN7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.6■□□□□ 0.89
Cnot11Q9CWN7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.6■□□□□ 0.89
Cnot11Q9CWN7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnot11Q9CWN7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cnot11Q9CWN7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnot11Q9CWN7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot11Q9CWN7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot11Q9CWN7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Cnot11Q9CWN7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot11Q9CWN7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cnot11Q9CWN7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnot11Q9CWN7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Gm22567-201ENSMUST00000175542 342 ntBASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cnot11Q9CWN7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cnot11Q9CWN7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnot11Q9CWN7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnot11Q9CWN7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cnot11Q9CWN7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cnot11Q9CWN7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnot11Q9CWN7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot11Q9CWN7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cnot11Q9CWN7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot11Q9CWN7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot11Q9CWN7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot11Q9CWN7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot11Q9CWN7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnot11Q9CWN7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot11Q9CWN7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot11Q9CWN7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot11Q9CWN7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnot11Q9CWN7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cnot11Q9CWN7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.55■□□□□ 0.88
Cnot11Q9CWN7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cnot11Q9CWN7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cnot11Q9CWN7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cnot11Q9CWN7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms