Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb20Q91XZ9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdhb20Q91XZ9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb20Q91XZ9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb20Q91XZ9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Gm45102-201ENSMUST00000207427 857 ntBASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb20Q91XZ9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.42■□□□□ 0.86
Pcdhb20Q91XZ9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Gm9959-201ENSMUST00000068277 390 ntBASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb20Q91XZ9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Etf1-202ENSMUST00000180351 108 ntBASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb20Q91XZ9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb20Q91XZ9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb20Q91XZ9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb20Q91XZ9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.38■□□□□ 0.85
Pcdhb20Q91XZ9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdhb20Q91XZ9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.38■□□□□ 0.85
Pcdhb20Q91XZ9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb20Q91XZ9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb20Q91XZ9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb20Q91XZ9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb20Q91XZ9 Gm14117-201ENSMUST00000122417 843 ntBASIC20.37■□□□□ 0.85
Pcdhb20Q91XZ9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb20Q91XZ9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb20Q91XZ9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb20Q91XZ9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb20Q91XZ9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb20Q91XZ9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb20Q91XZ9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb20Q91XZ9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb20Q91XZ9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.35■□□□□ 0.85
Pcdhb20Q91XZ9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Pcdhb20Q91XZ9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb20Q91XZ9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdhb20Q91XZ9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb20Q91XZ9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb20Q91XZ9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb20Q91XZ9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb20Q91XZ9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb20Q91XZ9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb20Q91XZ9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb20Q91XZ9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.32■□□□□ 0.84
Pcdhb20Q91XZ9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb20Q91XZ9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms