Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retreg1dQ8VE91 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retreg1dQ8VE91 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retreg1dQ8VE91 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retreg1dQ8VE91 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 Gm10232-201ENSMUST00000089221 720 ntBASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retreg1dQ8VE91 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retreg1dQ8VE91 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg1dQ8VE91 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg1dQ8VE91 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.98■□□□□ 0.95
Retreg1dQ8VE91 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg1dQ8VE91 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retreg1dQ8VE91 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.97■□□□□ 0.95
Retreg1dQ8VE91 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retreg1dQ8VE91 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.97■□□□□ 0.95
Retreg1dQ8VE91 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg1dQ8VE91 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg1dQ8VE91 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retreg1dQ8VE91 Gm14117-201ENSMUST00000122417 843 ntBASIC20.96■□□□□ 0.95
Retreg1dQ8VE91 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retreg1dQ8VE91 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Retreg1dQ8VE91 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retreg1dQ8VE91 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.94■□□□□ 0.94
Retreg1dQ8VE91 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Retreg1dQ8VE91 Gm45102-201ENSMUST00000207427 857 ntBASIC20.94■□□□□ 0.94
Retreg1dQ8VE91 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retreg1dQ8VE91 Gm9959-201ENSMUST00000068277 390 ntBASIC20.94■□□□□ 0.94
Retreg1dQ8VE91 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Retreg1dQ8VE91 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Retreg1dQ8VE91 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retreg1dQ8VE91 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Retreg1dQ8VE91 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retreg1dQ8VE91 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg1dQ8VE91 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg1dQ8VE91 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg1dQ8VE91 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg1dQ8VE91 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg1dQ8VE91 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retreg1dQ8VE91 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg1dQ8VE91 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg1dQ8VE91 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg1dQ8VE91 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg1dQ8VE91 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.91■□□□□ 0.94
Retreg1dQ8VE91 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg1dQ8VE91 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg1dQ8VE91 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retreg1dQ8VE91 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retreg1dQ8VE91 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retreg1dQ8VE91 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
Retreg1dQ8VE91 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
Retreg1dQ8VE91 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retreg1dQ8VE91 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retreg1dQ8VE91 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Retreg1dQ8VE91 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retreg1dQ8VE91 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg1dQ8VE91 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retreg1dQ8VE91 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg1dQ8VE91 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.88■□□□□ 0.93
Retreg1dQ8VE91 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.88■□□□□ 0.93
Retreg1dQ8VE91 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg1dQ8VE91 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retreg1dQ8VE91 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retreg1dQ8VE91 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg1dQ8VE91 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg1dQ8VE91 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg1dQ8VE91 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retreg1dQ8VE91 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg1dQ8VE91 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retreg1dQ8VE91 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retreg1dQ8VE91 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms