Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sft2d2Q8VD57 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sft2d2Q8VD57 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sft2d2Q8VD57 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sft2d2Q8VD57 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sft2d2Q8VD57 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sft2d2Q8VD57 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.18■□□□□ 0.34
Sft2d2Q8VD57 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sft2d2Q8VD57 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Zfp131-205ENSMUST00000223812 663 ntBASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sft2d2Q8VD57 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sft2d2Q8VD57 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Sft2d2Q8VD57 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.14■□□□□ 0.33
Sft2d2Q8VD57 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sft2d2Q8VD57 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sft2d2Q8VD57 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sft2d2Q8VD57 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.13■□□□□ 0.33
Sft2d2Q8VD57 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sft2d2Q8VD57 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Gm9397-201ENSMUST00000200125 605 ntBASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sft2d2Q8VD57 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.1■□□□□ 0.33
Sft2d2Q8VD57 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sft2d2Q8VD57 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sft2d2Q8VD57 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.1■□□□□ 0.33
Sft2d2Q8VD57 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sft2d2Q8VD57 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sft2d2Q8VD57 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Sft2d2Q8VD57 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sft2d2Q8VD57 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sft2d2Q8VD57 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sft2d2Q8VD57 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sft2d2Q8VD57 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sft2d2Q8VD57 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sft2d2Q8VD57 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sft2d2Q8VD57 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sft2d2Q8VD57 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sft2d2Q8VD57 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.08■□□□□ 0.32
Sft2d2Q8VD57 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sft2d2Q8VD57 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sft2d2Q8VD57 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms