Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lin28aQ8K3Y3 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.91■□□□□ 0.78
Lin28aQ8K3Y3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lin28aQ8K3Y3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lin28aQ8K3Y3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Lin28aQ8K3Y3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lin28aQ8K3Y3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.91■□□□□ 0.78
Lin28aQ8K3Y3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lin28aQ8K3Y3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.9■□□□□ 0.78
Lin28aQ8K3Y3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lin28aQ8K3Y3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lin28aQ8K3Y3 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.9■□□□□ 0.78
Lin28aQ8K3Y3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lin28aQ8K3Y3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lin28aQ8K3Y3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lin28aQ8K3Y3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lin28aQ8K3Y3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lin28aQ8K3Y3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lin28aQ8K3Y3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.87■□□□□ 0.77
Lin28aQ8K3Y3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lin28aQ8K3Y3 Etf1-202ENSMUST00000180351 108 ntBASIC19.87■□□□□ 0.77
Lin28aQ8K3Y3 Gm45102-201ENSMUST00000207427 857 ntBASIC19.87■□□□□ 0.77
Lin28aQ8K3Y3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lin28aQ8K3Y3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lin28aQ8K3Y3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin28aQ8K3Y3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lin28aQ8K3Y3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lin28aQ8K3Y3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin28aQ8K3Y3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.86■□□□□ 0.77
Lin28aQ8K3Y3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Lin28aQ8K3Y3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lin28aQ8K3Y3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lin28aQ8K3Y3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.84■□□□□ 0.77
Lin28aQ8K3Y3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lin28aQ8K3Y3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lin28aQ8K3Y3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lin28aQ8K3Y3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lin28aQ8K3Y3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lin28aQ8K3Y3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lin28aQ8K3Y3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.83■□□□□ 0.77
Lin28aQ8K3Y3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lin28aQ8K3Y3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lin28aQ8K3Y3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lin28aQ8K3Y3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lin28aQ8K3Y3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lin28aQ8K3Y3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lin28aQ8K3Y3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.82■□□□□ 0.76
Lin28aQ8K3Y3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.82■□□□□ 0.76
Lin28aQ8K3Y3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Lin28aQ8K3Y3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lin28aQ8K3Y3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lin28aQ8K3Y3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lin28aQ8K3Y3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lin28aQ8K3Y3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lin28aQ8K3Y3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Lin28aQ8K3Y3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lin28aQ8K3Y3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lin28aQ8K3Y3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lin28aQ8K3Y3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms