Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vps50Q8CI71 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps50Q8CI71 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps50Q8CI71 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps50Q8CI71 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps50Q8CI71 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps50Q8CI71 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps50Q8CI71 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Vps50Q8CI71 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.75■□□□□ 0.91
Vps50Q8CI71 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps50Q8CI71 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Vps50Q8CI71 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps50Q8CI71 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps50Q8CI71 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps50Q8CI71 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps50Q8CI71 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps50Q8CI71 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.73■□□□□ 0.91
Vps50Q8CI71 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps50Q8CI71 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.72■□□□□ 0.91
Vps50Q8CI71 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps50Q8CI71 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps50Q8CI71 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps50Q8CI71 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps50Q8CI71 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Vps50Q8CI71 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps50Q8CI71 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vps50Q8CI71 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps50Q8CI71 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps50Q8CI71 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps50Q8CI71 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Vps50Q8CI71 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Vps50Q8CI71 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vps50Q8CI71 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vps50Q8CI71 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps50Q8CI71 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Vps50Q8CI71 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps50Q8CI71 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps50Q8CI71 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vps50Q8CI71 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps50Q8CI71 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps50Q8CI71 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps50Q8CI71 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps50Q8CI71 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vps50Q8CI71 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps50Q8CI71 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps50Q8CI71 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps50Q8CI71 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vps50Q8CI71 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps50Q8CI71 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps50Q8CI71 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps50Q8CI71 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps50Q8CI71 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Vps50Q8CI71 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps50Q8CI71 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps50Q8CI71 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.66■□□□□ 0.9
Vps50Q8CI71 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vps50Q8CI71 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.66■□□□□ 0.9
Vps50Q8CI71 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vps50Q8CI71 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Vps50Q8CI71 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vps50Q8CI71 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps50Q8CI71 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.65■□□□□ 0.9
Vps50Q8CI71 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps50Q8CI71 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps50Q8CI71 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps50Q8CI71 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps50Q8CI71 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps50Q8CI71 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps50Q8CI71 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps50Q8CI71 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.64■□□□□ 0.89
Vps50Q8CI71 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps50Q8CI71 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps50Q8CI71 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps50Q8CI71 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps50Q8CI71 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps50Q8CI71 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.63■□□□□ 0.89
Vps50Q8CI71 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps50Q8CI71 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps50Q8CI71 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps50Q8CI71 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
Vps50Q8CI71 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Vps50Q8CI71 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps50Q8CI71 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps50Q8CI71 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps50Q8CI71 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps50Q8CI71 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.61■□□□□ 0.89
Vps50Q8CI71 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps50Q8CI71 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps50Q8CI71 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps50Q8CI71 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps50Q8CI71 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms