Protein–RNA interactions for Protein: Q8CH20

Cypt1, Cysteine-rich perinuclear theca protein 1, mousemouse

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cypt1Q8CH20 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
Cypt1Q8CH20 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cypt1Q8CH20 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Cypt1Q8CH20 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Cypt1Q8CH20 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cypt1Q8CH20 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cypt1Q8CH20 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
Cypt1Q8CH20 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Cypt1Q8CH20 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cypt1Q8CH20 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cypt1Q8CH20 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cypt1Q8CH20 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cypt1Q8CH20 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cypt1Q8CH20 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cypt1Q8CH20 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.48■■■□□ 2.15
Cypt1Q8CH20 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC28.47■■■□□ 2.15
Cypt1Q8CH20 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Cypt1Q8CH20 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cypt1Q8CH20 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
Cypt1Q8CH20 Gm4968-201ENSMUST00000071458 858 ntBASIC28.47■■■□□ 2.15
Cypt1Q8CH20 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Cypt1Q8CH20 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cypt1Q8CH20 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Cypt1Q8CH20 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cypt1Q8CH20 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Cypt1Q8CH20 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.44■■■□□ 2.14
Cypt1Q8CH20 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC28.44■■■□□ 2.14
Cypt1Q8CH20 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Cypt1Q8CH20 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC28.44■■■□□ 2.14
Cypt1Q8CH20 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cypt1Q8CH20 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cypt1Q8CH20 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Cypt1Q8CH20 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cypt1Q8CH20 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Cypt1Q8CH20 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
Cypt1Q8CH20 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Cypt1Q8CH20 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cypt1Q8CH20 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cypt1Q8CH20 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Cypt1Q8CH20 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC28.4■■■□□ 2.14
Cypt1Q8CH20 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Cypt1Q8CH20 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
Cypt1Q8CH20 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cypt1Q8CH20 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cypt1Q8CH20 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Cypt1Q8CH20 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC28.38■■■□□ 2.13
Cypt1Q8CH20 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Cypt1Q8CH20 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cypt1Q8CH20 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cypt1Q8CH20 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Cypt1Q8CH20 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC28.37■■■□□ 2.13
Cypt1Q8CH20 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cypt1Q8CH20 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cypt1Q8CH20 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cypt1Q8CH20 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cypt1Q8CH20 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC28.36■■■□□ 2.13
Cypt1Q8CH20 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cypt1Q8CH20 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Cypt1Q8CH20 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC28.35■■■□□ 2.13
Cypt1Q8CH20 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cypt1Q8CH20 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cypt1Q8CH20 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cypt1Q8CH20 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC28.34■■■□□ 2.13
Cypt1Q8CH20 Gm10399-202ENSMUST00000202768 748 ntBASIC28.34■■■□□ 2.13
Cypt1Q8CH20 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cypt1Q8CH20 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
Cypt1Q8CH20 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
Cypt1Q8CH20 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cypt1Q8CH20 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cypt1Q8CH20 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC28.32■■■□□ 2.12
Cypt1Q8CH20 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC28.32■■■□□ 2.12
Cypt1Q8CH20 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cypt1Q8CH20 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cypt1Q8CH20 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cypt1Q8CH20 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cypt1Q8CH20 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC28.3■■■□□ 2.12
Cypt1Q8CH20 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cypt1Q8CH20 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cypt1Q8CH20 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cypt1Q8CH20 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cypt1Q8CH20 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cypt1Q8CH20 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cypt1Q8CH20 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cypt1Q8CH20 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cypt1Q8CH20 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cypt1Q8CH20 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cypt1Q8CH20 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
Cypt1Q8CH20 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC28.28■■■□□ 2.12
Cypt1Q8CH20 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Cypt1Q8CH20 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cypt1Q8CH20 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cypt1Q8CH20 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cypt1Q8CH20 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC28.27■■■□□ 2.12
Cypt1Q8CH20 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC28.27■■■□□ 2.12
Cypt1Q8CH20 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Cypt1Q8CH20 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC28.26■■■□□ 2.11
Cypt1Q8CH20 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC28.25■■■□□ 2.11
Cypt1Q8CH20 Gm10517-202ENSMUST00000192970 758 ntBASIC28.25■■■□□ 2.11
Cypt1Q8CH20 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC28.25■■■□□ 2.11
Cypt1Q8CH20 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms