Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Smc5Q8CG46 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smc5Q8CG46 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smc5Q8CG46 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.53■■□□□ 1.84
Smc5Q8CG46 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smc5Q8CG46 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Smc5Q8CG46 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Smc5Q8CG46 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Smc5Q8CG46 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Smc5Q8CG46 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.51■■□□□ 1.83
Smc5Q8CG46 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smc5Q8CG46 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Smc5Q8CG46 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc5Q8CG46 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc5Q8CG46 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Smc5Q8CG46 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc5Q8CG46 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.5■■□□□ 1.83
Smc5Q8CG46 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Smc5Q8CG46 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smc5Q8CG46 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smc5Q8CG46 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smc5Q8CG46 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smc5Q8CG46 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Smc5Q8CG46 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.49■■□□□ 1.83
Smc5Q8CG46 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smc5Q8CG46 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Smc5Q8CG46 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Smc5Q8CG46 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC26.48■■□□□ 1.83
Smc5Q8CG46 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.48■■□□□ 1.83
Smc5Q8CG46 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Smc5Q8CG46 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Smc5Q8CG46 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Smc5Q8CG46 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc5Q8CG46 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC26.46■■□□□ 1.83
Smc5Q8CG46 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc5Q8CG46 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc5Q8CG46 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc5Q8CG46 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smc5Q8CG46 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Smc5Q8CG46 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Smc5Q8CG46 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Smc5Q8CG46 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.45■■□□□ 1.82
Smc5Q8CG46 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Smc5Q8CG46 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
Smc5Q8CG46 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Smc5Q8CG46 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smc5Q8CG46 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smc5Q8CG46 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smc5Q8CG46 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Smc5Q8CG46 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Smc5Q8CG46 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Smc5Q8CG46 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Smc5Q8CG46 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Smc5Q8CG46 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Smc5Q8CG46 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
Smc5Q8CG46 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Smc5Q8CG46 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smc5Q8CG46 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC26.42■■□□□ 1.82
Smc5Q8CG46 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smc5Q8CG46 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smc5Q8CG46 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smc5Q8CG46 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Smc5Q8CG46 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Smc5Q8CG46 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Smc5Q8CG46 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Smc5Q8CG46 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.41■■□□□ 1.82
Smc5Q8CG46 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Smc5Q8CG46 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smc5Q8CG46 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Smc5Q8CG46 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smc5Q8CG46 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Smc5Q8CG46 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC26.4■■□□□ 1.82
Smc5Q8CG46 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smc5Q8CG46 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smc5Q8CG46 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Smc5Q8CG46 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smc5Q8CG46 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smc5Q8CG46 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Smc5Q8CG46 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Smc5Q8CG46 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc5Q8CG46 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.38■■□□□ 1.81
Smc5Q8CG46 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.38■■□□□ 1.81
Smc5Q8CG46 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc5Q8CG46 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Smc5Q8CG46 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc5Q8CG46 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc5Q8CG46 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc5Q8CG46 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smc5Q8CG46 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Smc5Q8CG46 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smc5Q8CG46 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smc5Q8CG46 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 813.6 ms