Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfap54Q8C6S9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfap54Q8C6S9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Cfap54Q8C6S9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfap54Q8C6S9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cfap54Q8C6S9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfap54Q8C6S9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfap54Q8C6S9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cfap54Q8C6S9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cfap54Q8C6S9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cfap54Q8C6S9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cfap54Q8C6S9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.85■□□□□ 0.93
Cfap54Q8C6S9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cfap54Q8C6S9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cfap54Q8C6S9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cfap54Q8C6S9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cfap54Q8C6S9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cfap54Q8C6S9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cfap54Q8C6S9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cfap54Q8C6S9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap54Q8C6S9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap54Q8C6S9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap54Q8C6S9 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.83■□□□□ 0.93
Cfap54Q8C6S9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cfap54Q8C6S9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Cfap54Q8C6S9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cfap54Q8C6S9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cfap54Q8C6S9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.82■□□□□ 0.92
Cfap54Q8C6S9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap54Q8C6S9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap54Q8C6S9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Cfap54Q8C6S9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap54Q8C6S9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap54Q8C6S9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cfap54Q8C6S9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cfap54Q8C6S9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap54Q8C6S9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Cfap54Q8C6S9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cfap54Q8C6S9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cfap54Q8C6S9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cfap54Q8C6S9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap54Q8C6S9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap54Q8C6S9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.78■□□□□ 0.92
Cfap54Q8C6S9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cfap54Q8C6S9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap54Q8C6S9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.78■□□□□ 0.92
Cfap54Q8C6S9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap54Q8C6S9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap54Q8C6S9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Cfap54Q8C6S9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap54Q8C6S9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap54Q8C6S9 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.76■□□□□ 0.91
Cfap54Q8C6S9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap54Q8C6S9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap54Q8C6S9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap54Q8C6S9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.76■□□□□ 0.91
Cfap54Q8C6S9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Cfap54Q8C6S9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cfap54Q8C6S9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.75■□□□□ 0.91
Cfap54Q8C6S9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.75■□□□□ 0.91
Cfap54Q8C6S9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfap54Q8C6S9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.75■□□□□ 0.91
Cfap54Q8C6S9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Cfap54Q8C6S9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cfap54Q8C6S9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap54Q8C6S9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap54Q8C6S9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap54Q8C6S9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfap54Q8C6S9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cfap54Q8C6S9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Cfap54Q8C6S9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap54Q8C6S9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap54Q8C6S9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cfap54Q8C6S9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.73■□□□□ 0.91
Cfap54Q8C6S9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfap54Q8C6S9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap54Q8C6S9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms