Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
Ptcd1Q8C2E4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptcd1Q8C2E4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ptcd1Q8C2E4 Golgb1-201ENSMUST00000023534 498 ntBASIC26.39■■□□□ 1.82
Ptcd1Q8C2E4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ptcd1Q8C2E4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ptcd1Q8C2E4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ptcd1Q8C2E4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Ptcd1Q8C2E4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ptcd1Q8C2E4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ptcd1Q8C2E4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ptcd1Q8C2E4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ptcd1Q8C2E4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ptcd1Q8C2E4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.37■■□□□ 1.81
Ptcd1Q8C2E4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC26.37■■□□□ 1.81
Ptcd1Q8C2E4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC26.37■■□□□ 1.81
Ptcd1Q8C2E4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Ptcd1Q8C2E4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ptcd1Q8C2E4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.36■■□□□ 1.81
Ptcd1Q8C2E4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ptcd1Q8C2E4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ptcd1Q8C2E4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptcd1Q8C2E4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC26.34■■□□□ 1.81
Ptcd1Q8C2E4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ptcd1Q8C2E4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
Ptcd1Q8C2E4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Ptcd1Q8C2E4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd1Q8C2E4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd1Q8C2E4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd1Q8C2E4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd1Q8C2E4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd1Q8C2E4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd1Q8C2E4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ptcd1Q8C2E4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ptcd1Q8C2E4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.32■■□□□ 1.8
Ptcd1Q8C2E4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Ptcd1Q8C2E4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd1Q8C2E4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptcd1Q8C2E4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 Gm8495-201ENSMUST00000188740 694 ntBASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ptcd1Q8C2E4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Ptcd1Q8C2E4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ptcd1Q8C2E4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ptcd1Q8C2E4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ptcd1Q8C2E4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC26.3■■□□□ 1.8
Ptcd1Q8C2E4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ptcd1Q8C2E4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ptcd1Q8C2E4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.3■■□□□ 1.8
Ptcd1Q8C2E4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.29■■□□□ 1.8
Ptcd1Q8C2E4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ptcd1Q8C2E4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ptcd1Q8C2E4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ptcd1Q8C2E4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd1Q8C2E4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC26.28■■□□□ 1.8
Ptcd1Q8C2E4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.28■■□□□ 1.8
Ptcd1Q8C2E4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ptcd1Q8C2E4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.27■■□□□ 1.8
Ptcd1Q8C2E4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptcd1Q8C2E4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.27■■□□□ 1.8
Ptcd1Q8C2E4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptcd1Q8C2E4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.27■■□□□ 1.8
Ptcd1Q8C2E4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.27■■□□□ 1.8
Ptcd1Q8C2E4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptcd1Q8C2E4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ptcd1Q8C2E4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ptcd1Q8C2E4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ptcd1Q8C2E4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ptcd1Q8C2E4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ptcd1Q8C2E4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Ptcd1Q8C2E4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ptcd1Q8C2E4 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.25■■□□□ 1.79
Ptcd1Q8C2E4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ptcd1Q8C2E4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms