Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps9d1Q8C190 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps9d1Q8C190 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps9d1Q8C190 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Vps9d1Q8C190 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps9d1Q8C190 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps9d1Q8C190 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.84■□□□□ 0.77
Vps9d1Q8C190 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Vps9d1Q8C190 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps9d1Q8C190 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Vps9d1Q8C190 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.83■□□□□ 0.77
Vps9d1Q8C190 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Vps9d1Q8C190 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Vps9d1Q8C190 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Vps9d1Q8C190 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Vps9d1Q8C190 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Gm16437-201ENSMUST00000025669 507 ntBASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps9d1Q8C190 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps9d1Q8C190 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Vps9d1Q8C190 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps9d1Q8C190 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps9d1Q8C190 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vps9d1Q8C190 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps9d1Q8C190 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps9d1Q8C190 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps9d1Q8C190 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps9d1Q8C190 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.8■□□□□ 0.76
Vps9d1Q8C190 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps9d1Q8C190 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps9d1Q8C190 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Vps9d1Q8C190 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps9d1Q8C190 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Vps9d1Q8C190 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Vps9d1Q8C190 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps9d1Q8C190 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps9d1Q8C190 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.78■□□□□ 0.76
Vps9d1Q8C190 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Vps9d1Q8C190 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps9d1Q8C190 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps9d1Q8C190 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps9d1Q8C190 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps9d1Q8C190 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps9d1Q8C190 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Vps9d1Q8C190 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps9d1Q8C190 Gm44428-201ENSMUST00000204474 874 ntBASIC19.76■□□□□ 0.75
Vps9d1Q8C190 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps9d1Q8C190 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps9d1Q8C190 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.75■□□□□ 0.75
Vps9d1Q8C190 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps9d1Q8C190 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps9d1Q8C190 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps9d1Q8C190 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Vps9d1Q8C190 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps9d1Q8C190 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps9d1Q8C190 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps9d1Q8C190 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.73■□□□□ 0.75
Vps9d1Q8C190 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.73■□□□□ 0.75
Vps9d1Q8C190 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps9d1Q8C190 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps9d1Q8C190 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Vps9d1Q8C190 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps9d1Q8C190 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps9d1Q8C190 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps9d1Q8C190 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps9d1Q8C190 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms