Protein–RNA interactions for Protein: Q8C0S0

4932411N23Rik, RIKEN cDNA 4932411N23, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4932411N23RikQ8C0S0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
4932411N23RikQ8C0S0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
4932411N23RikQ8C0S0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
4932411N23RikQ8C0S0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
4932411N23RikQ8C0S0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
4932411N23RikQ8C0S0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
4932411N23RikQ8C0S0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
4932411N23RikQ8C0S0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
4932411N23RikQ8C0S0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.36■■□□□ 1.01
4932411N23RikQ8C0S0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
4932411N23RikQ8C0S0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
4932411N23RikQ8C0S0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
4932411N23RikQ8C0S0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
4932411N23RikQ8C0S0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
4932411N23RikQ8C0S0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
4932411N23RikQ8C0S0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
4932411N23RikQ8C0S0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
4932411N23RikQ8C0S0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
4932411N23RikQ8C0S0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
4932411N23RikQ8C0S0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
4932411N23RikQ8C0S0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.34■■□□□ 1.01
4932411N23RikQ8C0S0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
4932411N23RikQ8C0S0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
4932411N23RikQ8C0S0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.33■■□□□ 1.01
4932411N23RikQ8C0S0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
4932411N23RikQ8C0S0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.33■■□□□ 1.01
4932411N23RikQ8C0S0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
4932411N23RikQ8C0S0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.33■■□□□ 1.01
4932411N23RikQ8C0S0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
4932411N23RikQ8C0S0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
4932411N23RikQ8C0S0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
4932411N23RikQ8C0S0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.33■■□□□ 1
4932411N23RikQ8C0S0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.32■■□□□ 1
4932411N23RikQ8C0S0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
4932411N23RikQ8C0S0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.32■■□□□ 1
4932411N23RikQ8C0S0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.32■■□□□ 1
4932411N23RikQ8C0S0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
4932411N23RikQ8C0S0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.32■■□□□ 1
4932411N23RikQ8C0S0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.32■■□□□ 1
4932411N23RikQ8C0S0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
4932411N23RikQ8C0S0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
4932411N23RikQ8C0S0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
4932411N23RikQ8C0S0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
4932411N23RikQ8C0S0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
4932411N23RikQ8C0S0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
4932411N23RikQ8C0S0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
4932411N23RikQ8C0S0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
4932411N23RikQ8C0S0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
4932411N23RikQ8C0S0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
4932411N23RikQ8C0S0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.3■■□□□ 1
4932411N23RikQ8C0S0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
4932411N23RikQ8C0S0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
4932411N23RikQ8C0S0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
4932411N23RikQ8C0S0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.29■■□□□ 1
4932411N23RikQ8C0S0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
4932411N23RikQ8C0S0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.28■■□□□ 1
4932411N23RikQ8C0S0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.28■■□□□ 1
4932411N23RikQ8C0S0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
4932411N23RikQ8C0S0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
4932411N23RikQ8C0S0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
4932411N23RikQ8C0S0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
4932411N23RikQ8C0S0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.28■■□□□ 1
4932411N23RikQ8C0S0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
4932411N23RikQ8C0S0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
4932411N23RikQ8C0S0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
4932411N23RikQ8C0S0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
4932411N23RikQ8C0S0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
4932411N23RikQ8C0S0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
4932411N23RikQ8C0S0 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.25■□□□□ 0.99
4932411N23RikQ8C0S0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.25■□□□□ 0.99
4932411N23RikQ8C0S0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
4932411N23RikQ8C0S0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.24■□□□□ 0.99
4932411N23RikQ8C0S0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms