Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cpsf7Q8BTV2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf7Q8BTV2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.28■■□□□ 1
Cpsf7Q8BTV2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf7Q8BTV2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.28■■□□□ 1
Cpsf7Q8BTV2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf7Q8BTV2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cpsf7Q8BTV2 Gm6311-201ENSMUST00000073790 878 ntBASIC21.27■■□□□ 1
Cpsf7Q8BTV2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf7Q8BTV2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.27■■□□□ 1
Cpsf7Q8BTV2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cpsf7Q8BTV2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cpsf7Q8BTV2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf7Q8BTV2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cpsf7Q8BTV2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf7Q8BTV2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf7Q8BTV2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf7Q8BTV2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.26■□□□□ 0.99
Cpsf7Q8BTV2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf7Q8BTV2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Cpsf7Q8BTV2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf7Q8BTV2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf7Q8BTV2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cpsf7Q8BTV2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf7Q8BTV2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf7Q8BTV2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.24■□□□□ 0.99
Cpsf7Q8BTV2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cpsf7Q8BTV2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Cpsf7Q8BTV2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cpsf7Q8BTV2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf7Q8BTV2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.23■□□□□ 0.99
Cpsf7Q8BTV2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf7Q8BTV2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cpsf7Q8BTV2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf7Q8BTV2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf7Q8BTV2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf7Q8BTV2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf7Q8BTV2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.22■□□□□ 0.99
Cpsf7Q8BTV2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf7Q8BTV2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf7Q8BTV2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpsf7Q8BTV2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf7Q8BTV2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf7Q8BTV2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf7Q8BTV2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpsf7Q8BTV2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf7Q8BTV2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpsf7Q8BTV2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf7Q8BTV2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf7Q8BTV2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cpsf7Q8BTV2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf7Q8BTV2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf7Q8BTV2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cpsf7Q8BTV2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Cpsf7Q8BTV2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpsf7Q8BTV2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpsf7Q8BTV2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf7Q8BTV2 Gm11175-201ENSMUST00000116172 543 ntBASIC21.16■□□□□ 0.98
Cpsf7Q8BTV2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf7Q8BTV2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf7Q8BTV2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cpsf7Q8BTV2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.15■□□□□ 0.98
Cpsf7Q8BTV2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms