Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Suds3Q8BR65 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Suds3Q8BR65 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Suds3Q8BR65 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Suds3Q8BR65 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Suds3Q8BR65 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Suds3Q8BR65 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Suds3Q8BR65 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Suds3Q8BR65 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Suds3Q8BR65 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Suds3Q8BR65 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Suds3Q8BR65 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Suds3Q8BR65 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Suds3Q8BR65 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Suds3Q8BR65 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Gm22567-201ENSMUST00000175542 342 ntBASIC21.62■■□□□ 1.05
Suds3Q8BR65 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Suds3Q8BR65 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.62■■□□□ 1.05
Suds3Q8BR65 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Suds3Q8BR65 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Suds3Q8BR65 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Suds3Q8BR65 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Suds3Q8BR65 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Suds3Q8BR65 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Suds3Q8BR65 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Suds3Q8BR65 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Suds3Q8BR65 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Suds3Q8BR65 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Suds3Q8BR65 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Suds3Q8BR65 Gm5921-201ENSMUST00000075898 882 ntBASIC21.6■■□□□ 1.05
Suds3Q8BR65 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.6■■□□□ 1.05
Suds3Q8BR65 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Suds3Q8BR65 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.6■■□□□ 1.05
Suds3Q8BR65 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Suds3Q8BR65 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Suds3Q8BR65 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Suds3Q8BR65 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.59■■□□□ 1.05
Suds3Q8BR65 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Suds3Q8BR65 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Suds3Q8BR65 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.59■■□□□ 1.05
Suds3Q8BR65 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.59■■□□□ 1.05
Suds3Q8BR65 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Suds3Q8BR65 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Suds3Q8BR65 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Suds3Q8BR65 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Suds3Q8BR65 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Suds3Q8BR65 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Suds3Q8BR65 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Suds3Q8BR65 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Suds3Q8BR65 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.57■■□□□ 1.04
Suds3Q8BR65 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Suds3Q8BR65 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Suds3Q8BR65 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.57■■□□□ 1.04
Suds3Q8BR65 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.57■■□□□ 1.04
Suds3Q8BR65 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Suds3Q8BR65 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Suds3Q8BR65 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Suds3Q8BR65 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Suds3Q8BR65 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.56■■□□□ 1.04
Suds3Q8BR65 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Suds3Q8BR65 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Suds3Q8BR65 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Suds3Q8BR65 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Suds3Q8BR65 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Suds3Q8BR65 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Suds3Q8BR65 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Suds3Q8BR65 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Suds3Q8BR65 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Suds3Q8BR65 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Suds3Q8BR65 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.55■■□□□ 1.04
Suds3Q8BR65 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Suds3Q8BR65 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Suds3Q8BR65 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.55■■□□□ 1.04
Suds3Q8BR65 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Suds3Q8BR65 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Suds3Q8BR65 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Suds3Q8BR65 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Suds3Q8BR65 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Suds3Q8BR65 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Suds3Q8BR65 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms