Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atpaf1Q811I0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atpaf1Q811I0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atpaf1Q811I0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atpaf1Q811I0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Atpaf1Q811I0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atpaf1Q811I0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atpaf1Q811I0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atpaf1Q811I0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atpaf1Q811I0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.39■□□□□ 0.37
Atpaf1Q811I0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Atpaf1Q811I0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atpaf1Q811I0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atpaf1Q811I0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atpaf1Q811I0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atpaf1Q811I0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.38■□□□□ 0.37
Atpaf1Q811I0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atpaf1Q811I0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.37■□□□□ 0.37
Atpaf1Q811I0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atpaf1Q811I0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atpaf1Q811I0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atpaf1Q811I0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atpaf1Q811I0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atpaf1Q811I0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.36■□□□□ 0.37
Atpaf1Q811I0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atpaf1Q811I0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.36■□□□□ 0.37
Atpaf1Q811I0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atpaf1Q811I0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.36■□□□□ 0.37
Atpaf1Q811I0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atpaf1Q811I0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atpaf1Q811I0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atpaf1Q811I0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Atpaf1Q811I0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atpaf1Q811I0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atpaf1Q811I0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.34■□□□□ 0.37
Atpaf1Q811I0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atpaf1Q811I0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atpaf1Q811I0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atpaf1Q811I0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atpaf1Q811I0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atpaf1Q811I0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Atpaf1Q811I0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atpaf1Q811I0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atpaf1Q811I0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atpaf1Q811I0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atpaf1Q811I0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Atpaf1Q811I0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atpaf1Q811I0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atpaf1Q811I0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atpaf1Q811I0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atpaf1Q811I0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atpaf1Q811I0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atpaf1Q811I0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atpaf1Q811I0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atpaf1Q811I0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atpaf1Q811I0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atpaf1Q811I0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atpaf1Q811I0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atpaf1Q811I0 Golph3-202ENSMUST00000226517 2359 ntBASIC17.29■□□□□ 0.36
Atpaf1Q811I0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Atpaf1Q811I0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atpaf1Q811I0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atpaf1Q811I0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atpaf1Q811I0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atpaf1Q811I0 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.28■□□□□ 0.36
Atpaf1Q811I0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atpaf1Q811I0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atpaf1Q811I0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atpaf1Q811I0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atpaf1Q811I0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Atpaf1Q811I0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atpaf1Q811I0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Atpaf1Q811I0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atpaf1Q811I0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atpaf1Q811I0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atpaf1Q811I0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atpaf1Q811I0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atpaf1Q811I0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atpaf1Q811I0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms