Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ush1gQ80T11 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ush1gQ80T11 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.36■■□□□ 1.33
Ush1gQ80T11 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ush1gQ80T11 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Ush1gQ80T11 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ush1gQ80T11 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ush1gQ80T11 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.35■■□□□ 1.33
Ush1gQ80T11 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ush1gQ80T11 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ush1gQ80T11 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ush1gQ80T11 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ush1gQ80T11 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ush1gQ80T11 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ush1gQ80T11 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ush1gQ80T11 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ush1gQ80T11 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ush1gQ80T11 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ush1gQ80T11 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ush1gQ80T11 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.32■■□□□ 1.32
Ush1gQ80T11 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ush1gQ80T11 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ush1gQ80T11 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ush1gQ80T11 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ush1gQ80T11 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ush1gQ80T11 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Ush1gQ80T11 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ush1gQ80T11 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.31■■□□□ 1.32
Ush1gQ80T11 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Ush1gQ80T11 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.3■■□□□ 1.32
Ush1gQ80T11 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.3■■□□□ 1.32
Ush1gQ80T11 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ush1gQ80T11 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ush1gQ80T11 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ush1gQ80T11 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ush1gQ80T11 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ush1gQ80T11 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ush1gQ80T11 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ush1gQ80T11 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ush1gQ80T11 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ush1gQ80T11 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ush1gQ80T11 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ush1gQ80T11 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.29■■□□□ 1.32
Ush1gQ80T11 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ush1gQ80T11 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ush1gQ80T11 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Ush1gQ80T11 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ush1gQ80T11 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.28■■□□□ 1.32
Ush1gQ80T11 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ush1gQ80T11 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ush1gQ80T11 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ush1gQ80T11 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ush1gQ80T11 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ush1gQ80T11 Gm12922-201ENSMUST00000120626 809 ntBASIC23.27■■□□□ 1.32
Ush1gQ80T11 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ush1gQ80T11 Gm10399-202ENSMUST00000202768 748 ntBASIC23.27■■□□□ 1.32
Ush1gQ80T11 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ush1gQ80T11 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ush1gQ80T11 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.26■■□□□ 1.31
Ush1gQ80T11 Gm21956-201ENSMUST00000179946 522 ntBASIC23.26■■□□□ 1.31
Ush1gQ80T11 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.26■■□□□ 1.31
Ush1gQ80T11 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
Ush1gQ80T11 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ush1gQ80T11 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Ush1gQ80T11 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ush1gQ80T11 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Ush1gQ80T11 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ush1gQ80T11 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ush1gQ80T11 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ush1gQ80T11 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ush1gQ80T11 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ush1gQ80T11 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.24■■□□□ 1.31
Ush1gQ80T11 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ush1gQ80T11 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ush1gQ80T11 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ush1gQ80T11 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ush1gQ80T11 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ush1gQ80T11 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.23■■□□□ 1.31
Ush1gQ80T11 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.23■■□□□ 1.31
Ush1gQ80T11 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ush1gQ80T11 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.23■■□□□ 1.31
Ush1gQ80T11 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ush1gQ80T11 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ush1gQ80T11 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ush1gQ80T11 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Ush1gQ80T11 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ush1gQ80T11 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.22■■□□□ 1.31
Ush1gQ80T11 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ush1gQ80T11 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ush1gQ80T11 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ush1gQ80T11 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ush1gQ80T11 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ush1gQ80T11 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ush1gQ80T11 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ush1gQ80T11 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ush1gQ80T11 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ush1gQ80T11 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ush1gQ80T11 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ush1gQ80T11 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ush1gQ80T11 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms