Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sox11Q7M6Y2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sox11Q7M6Y2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sox11Q7M6Y2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sox11Q7M6Y2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
Sox11Q7M6Y2 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.64■■□□□ 1.05
Sox11Q7M6Y2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sox11Q7M6Y2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox11Q7M6Y2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox11Q7M6Y2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox11Q7M6Y2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Sox11Q7M6Y2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sox11Q7M6Y2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox11Q7M6Y2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox11Q7M6Y2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.62■■□□□ 1.05
Sox11Q7M6Y2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox11Q7M6Y2 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.62■■□□□ 1.05
Sox11Q7M6Y2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox11Q7M6Y2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox11Q7M6Y2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox11Q7M6Y2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Sox11Q7M6Y2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sox11Q7M6Y2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox11Q7M6Y2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Sox11Q7M6Y2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox11Q7M6Y2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Sox11Q7M6Y2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox11Q7M6Y2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.58■■□□□ 1.05
Sox11Q7M6Y2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
Sox11Q7M6Y2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Sox11Q7M6Y2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sox11Q7M6Y2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sox11Q7M6Y2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.57■■□□□ 1.04
Sox11Q7M6Y2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox11Q7M6Y2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox11Q7M6Y2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sox11Q7M6Y2 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Gm27454-201ENSMUST00000185090 204 ntBASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox11Q7M6Y2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox11Q7M6Y2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox11Q7M6Y2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Sox11Q7M6Y2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox11Q7M6Y2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sox11Q7M6Y2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox11Q7M6Y2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox11Q7M6Y2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox11Q7M6Y2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox11Q7M6Y2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sox11Q7M6Y2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox11Q7M6Y2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sox11Q7M6Y2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox11Q7M6Y2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox11Q7M6Y2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Sox11Q7M6Y2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox11Q7M6Y2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Sox11Q7M6Y2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Sox11Q7M6Y2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox11Q7M6Y2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.52■■□□□ 1.04
Sox11Q7M6Y2 Golgb1-201ENSMUST00000023534 498 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms