Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vma21Q78T54 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21Q78T54 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.32■□□□□ 0.36
Vma21Q78T54 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21Q78T54 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vma21Q78T54 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21Q78T54 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.32■□□□□ 0.36
Vma21Q78T54 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vma21Q78T54 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.32■□□□□ 0.36
Vma21Q78T54 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21Q78T54 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Vma21Q78T54 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vma21Q78T54 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Vma21Q78T54 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Vma21Q78T54 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Gm9806-201ENSMUST00000051080 552 ntBASIC17.3■□□□□ 0.36
Vma21Q78T54 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.3■□□□□ 0.36
Vma21Q78T54 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vma21Q78T54 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Vma21Q78T54 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.29■□□□□ 0.36
Vma21Q78T54 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Vma21Q78T54 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Vma21Q78T54 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vma21Q78T54 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.29■□□□□ 0.36
Vma21Q78T54 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.29■□□□□ 0.36
Vma21Q78T54 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21Q78T54 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.28■□□□□ 0.36
Vma21Q78T54 Scarna2-201ENSMUST00000157560 414 ntBASIC17.28■□□□□ 0.36
Vma21Q78T54 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21Q78T54 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21Q78T54 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21Q78T54 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vma21Q78T54 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21Q78T54 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21Q78T54 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21Q78T54 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vma21Q78T54 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vma21Q78T54 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Vma21Q78T54 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.27■□□□□ 0.36
Vma21Q78T54 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Vma21Q78T54 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Vma21Q78T54 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vma21Q78T54 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vma21Q78T54 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vma21Q78T54 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vma21Q78T54 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vma21Q78T54 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vma21Q78T54 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Vma21Q78T54 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.26■□□□□ 0.35
Vma21Q78T54 Gm16437-201ENSMUST00000025669 507 ntBASIC17.26■□□□□ 0.35
Vma21Q78T54 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vma21Q78T54 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.26■□□□□ 0.35
Vma21Q78T54 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21Q78T54 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.25■□□□□ 0.35
Vma21Q78T54 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vma21Q78T54 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Vma21Q78T54 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21Q78T54 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vma21Q78T54 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.25■□□□□ 0.35
Vma21Q78T54 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vma21Q78T54 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vma21Q78T54 Gm11687-201ENSMUST00000118911 886 ntBASIC17.24■□□□□ 0.35
Vma21Q78T54 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vma21Q78T54 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.24■□□□□ 0.35
Vma21Q78T54 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vma21Q78T54 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vma21Q78T54 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.24■□□□□ 0.35
Vma21Q78T54 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vma21Q78T54 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Vma21Q78T54 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21Q78T54 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.23■□□□□ 0.35
Vma21Q78T54 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.23■□□□□ 0.35
Vma21Q78T54 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21Q78T54 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vma21Q78T54 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.23■□□□□ 0.35
Vma21Q78T54 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21Q78T54 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.22■□□□□ 0.35
Vma21Q78T54 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21Q78T54 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21Q78T54 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21Q78T54 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vma21Q78T54 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Vma21Q78T54 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vma21Q78T54 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vma21Q78T54 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.21■□□□□ 0.35
Vma21Q78T54 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.21■□□□□ 0.35
Vma21Q78T54 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vma21Q78T54 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vma21Q78T54 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.2■□□□□ 0.34
Vma21Q78T54 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vma21Q78T54 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.2■□□□□ 0.34
Vma21Q78T54 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vma21Q78T54 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms