Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.92■■□□□ 1.58
Scn10aQ6QIY3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Scn10aQ6QIY3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Scn10aQ6QIY3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Scn10aQ6QIY3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Scn10aQ6QIY3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Scn10aQ6QIY3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Scn10aQ6QIY3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Scn10aQ6QIY3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.9■■□□□ 1.58
Scn10aQ6QIY3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
Scn10aQ6QIY3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Scn10aQ6QIY3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.89■■□□□ 1.57
Scn10aQ6QIY3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Scn10aQ6QIY3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Scn10aQ6QIY3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Scn10aQ6QIY3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Scn10aQ6QIY3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Scn10aQ6QIY3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.87■■□□□ 1.57
Scn10aQ6QIY3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Scn10aQ6QIY3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC24.87■■□□□ 1.57
Scn10aQ6QIY3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.86■■□□□ 1.57
Scn10aQ6QIY3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Scn10aQ6QIY3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
Scn10aQ6QIY3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Scn10aQ6QIY3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Scn10aQ6QIY3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Scn10aQ6QIY3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Scn10aQ6QIY3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.85■■□□□ 1.57
Scn10aQ6QIY3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.85■■□□□ 1.57
Scn10aQ6QIY3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Scn10aQ6QIY3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Scn10aQ6QIY3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scn10aQ6QIY3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scn10aQ6QIY3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Scn10aQ6QIY3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.84■■□□□ 1.57
Scn10aQ6QIY3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Scn10aQ6QIY3 Gm8495-201ENSMUST00000188740 694 ntBASIC24.84■■□□□ 1.57
Scn10aQ6QIY3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.83■■□□□ 1.57
Scn10aQ6QIY3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Scn10aQ6QIY3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Scn10aQ6QIY3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Scn10aQ6QIY3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Scn10aQ6QIY3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
Scn10aQ6QIY3 Gm6139-201ENSMUST00000079261 882 ntBASIC24.82■■□□□ 1.56
Scn10aQ6QIY3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Scn10aQ6QIY3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
Scn10aQ6QIY3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Scn10aQ6QIY3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scn10aQ6QIY3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Scn10aQ6QIY3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scn10aQ6QIY3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn10aQ6QIY3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn10aQ6QIY3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn10aQ6QIY3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn10aQ6QIY3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.8■■□□□ 1.56
Scn10aQ6QIY3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn10aQ6QIY3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scn10aQ6QIY3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Scn10aQ6QIY3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scn10aQ6QIY3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Scn10aQ6QIY3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Scn10aQ6QIY3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scn10aQ6QIY3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.79■■□□□ 1.56
Scn10aQ6QIY3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Scn10aQ6QIY3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Scn10aQ6QIY3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.78■■□□□ 1.56
Scn10aQ6QIY3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Scn10aQ6QIY3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scn10aQ6QIY3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Scn10aQ6QIY3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scn10aQ6QIY3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scn10aQ6QIY3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scn10aQ6QIY3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scn10aQ6QIY3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scn10aQ6QIY3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Scn10aQ6QIY3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scn10aQ6QIY3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Scn10aQ6QIY3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scn10aQ6QIY3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.75■■□□□ 1.55
Scn10aQ6QIY3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scn10aQ6QIY3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms