Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpenQ62504 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.4■□□□□ 0.7
SpenQ62504 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpenQ62504 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.4■□□□□ 0.7
SpenQ62504 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpenQ62504 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpenQ62504 Gm26571-201ENSMUST00000181399 666 ntBASIC19.4■□□□□ 0.7
SpenQ62504 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpenQ62504 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SpenQ62504 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpenQ62504 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SpenQ62504 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SpenQ62504 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SpenQ62504 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpenQ62504 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SpenQ62504 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SpenQ62504 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpenQ62504 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpenQ62504 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SpenQ62504 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SpenQ62504 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SpenQ62504 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SpenQ62504 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SpenQ62504 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SpenQ62504 Gm10399-202ENSMUST00000202768 748 ntBASIC19.37■□□□□ 0.69
SpenQ62504 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.37■□□□□ 0.69
SpenQ62504 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SpenQ62504 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.37■□□□□ 0.69
SpenQ62504 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SpenQ62504 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SpenQ62504 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SpenQ62504 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.37■□□□□ 0.69
SpenQ62504 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SpenQ62504 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SpenQ62504 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.36■□□□□ 0.69
SpenQ62504 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SpenQ62504 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SpenQ62504 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SpenQ62504 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SpenQ62504 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SpenQ62504 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SpenQ62504 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SpenQ62504 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SpenQ62504 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SpenQ62504 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SpenQ62504 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.35■□□□□ 0.69
SpenQ62504 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SpenQ62504 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SpenQ62504 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SpenQ62504 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SpenQ62504 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SpenQ62504 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SpenQ62504 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SpenQ62504 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.34■□□□□ 0.69
SpenQ62504 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SpenQ62504 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SpenQ62504 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SpenQ62504 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SpenQ62504 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SpenQ62504 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.33■□□□□ 0.69
SpenQ62504 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SpenQ62504 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SpenQ62504 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SpenQ62504 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SpenQ62504 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SpenQ62504 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
SpenQ62504 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SpenQ62504 Gm5874-201ENSMUST00000096101 508 ntBASIC19.32■□□□□ 0.68
SpenQ62504 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SpenQ62504 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SpenQ62504 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SpenQ62504 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SpenQ62504 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SpenQ62504 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SpenQ62504 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SpenQ62504 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SpenQ62504 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SpenQ62504 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SpenQ62504 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SpenQ62504 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SpenQ62504 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SpenQ62504 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.31■□□□□ 0.68
SpenQ62504 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SpenQ62504 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SpenQ62504 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SpenQ62504 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SpenQ62504 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SpenQ62504 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.3■□□□□ 0.68
SpenQ62504 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SpenQ62504 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.3■□□□□ 0.68
SpenQ62504 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SpenQ62504 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SpenQ62504 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SpenQ62504 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SpenQ62504 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.29■□□□□ 0.68
SpenQ62504 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SpenQ62504 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
SpenQ62504 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SpenQ62504 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SpenQ62504 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms