Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.69■□□□□ 0.9
AtmQ62388 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.69■□□□□ 0.9
AtmQ62388 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AtmQ62388 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AtmQ62388 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AtmQ62388 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
AtmQ62388 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AtmQ62388 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
AtmQ62388 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
AtmQ62388 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
AtmQ62388 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AtmQ62388 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AtmQ62388 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
AtmQ62388 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.67■□□□□ 0.9
AtmQ62388 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
AtmQ62388 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
AtmQ62388 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
AtmQ62388 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.66■□□□□ 0.9
AtmQ62388 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
AtmQ62388 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AtmQ62388 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.65■□□□□ 0.9
AtmQ62388 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
AtmQ62388 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
AtmQ62388 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.65■□□□□ 0.9
AtmQ62388 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AtmQ62388 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AtmQ62388 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
AtmQ62388 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AtmQ62388 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
AtmQ62388 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
AtmQ62388 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
AtmQ62388 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
AtmQ62388 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AtmQ62388 Gm10849-201ENSMUST00000100397 618 ntBASIC20.64■□□□□ 0.89
AtmQ62388 Gm7291-201ENSMUST00000199147 382 ntBASIC20.64■□□□□ 0.89
AtmQ62388 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
AtmQ62388 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AtmQ62388 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AtmQ62388 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AtmQ62388 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AtmQ62388 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.62■□□□□ 0.89
AtmQ62388 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
AtmQ62388 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AtmQ62388 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
AtmQ62388 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AtmQ62388 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AtmQ62388 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
AtmQ62388 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AtmQ62388 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AtmQ62388 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.61■□□□□ 0.89
AtmQ62388 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AtmQ62388 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AtmQ62388 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AtmQ62388 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AtmQ62388 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.6■□□□□ 0.89
AtmQ62388 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AtmQ62388 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.6■□□□□ 0.89
AtmQ62388 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AtmQ62388 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AtmQ62388 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AtmQ62388 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AtmQ62388 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.59■□□□□ 0.89
AtmQ62388 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
AtmQ62388 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.59■□□□□ 0.89
AtmQ62388 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
AtmQ62388 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AtmQ62388 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AtmQ62388 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AtmQ62388 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AtmQ62388 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AtmQ62388 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
AtmQ62388 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.88
AtmQ62388 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AtmQ62388 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.57■□□□□ 0.88
AtmQ62388 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AtmQ62388 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
AtmQ62388 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.57■□□□□ 0.88
AtmQ62388 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AtmQ62388 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.57■□□□□ 0.88
AtmQ62388 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AtmQ62388 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AtmQ62388 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.57■□□□□ 0.88
AtmQ62388 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AtmQ62388 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
AtmQ62388 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AtmQ62388 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AtmQ62388 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
AtmQ62388 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
AtmQ62388 Gm27405-201ENSMUST00000184201 112 ntBASIC20.56■□□□□ 0.88
AtmQ62388 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.55■□□□□ 0.88
AtmQ62388 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
AtmQ62388 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.55■□□□□ 0.88
AtmQ62388 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
AtmQ62388 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
AtmQ62388 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AtmQ62388 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AtmQ62388 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AtmQ62388 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
AtmQ62388 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.54■□□□□ 0.88
AtmQ62388 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms