Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.83■□□□□ 0.45
Foxf1Q61080 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Foxf1Q61080 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Foxf1Q61080 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxf1Q61080 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxf1Q61080 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Foxf1Q61080 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxf1Q61080 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Foxf1Q61080 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxf1Q61080 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Foxf1Q61080 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Foxf1Q61080 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Foxf1Q61080 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Foxf1Q61080 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxf1Q61080 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxf1Q61080 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Foxf1Q61080 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxf1Q61080 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxf1Q61080 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Foxf1Q61080 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxf1Q61080 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Foxf1Q61080 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.81■□□□□ 0.44
Foxf1Q61080 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Foxf1Q61080 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Foxf1Q61080 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Foxf1Q61080 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Foxf1Q61080 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxf1Q61080 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.8■□□□□ 0.44
Foxf1Q61080 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.8■□□□□ 0.44
Foxf1Q61080 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxf1Q61080 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxf1Q61080 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.8■□□□□ 0.44
Foxf1Q61080 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Foxf1Q61080 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Foxf1Q61080 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.79■□□□□ 0.44
Foxf1Q61080 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxf1Q61080 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.79■□□□□ 0.44
Foxf1Q61080 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Foxf1Q61080 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Foxf1Q61080 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxf1Q61080 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxf1Q61080 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxf1Q61080 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxf1Q61080 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxf1Q61080 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.77■□□□□ 0.44
Foxf1Q61080 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.77■□□□□ 0.44
Foxf1Q61080 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Foxf1Q61080 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.77■□□□□ 0.44
Foxf1Q61080 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Foxf1Q61080 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Foxf1Q61080 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Foxf1Q61080 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Foxf1Q61080 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Foxf1Q61080 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxf1Q61080 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Foxf1Q61080 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxf1Q61080 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxf1Q61080 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxf1Q61080 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxf1Q61080 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxf1Q61080 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Foxf1Q61080 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Foxf1Q61080 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.75■□□□□ 0.43
Foxf1Q61080 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxf1Q61080 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Foxf1Q61080 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Foxf1Q61080 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Foxf1Q61080 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.74■□□□□ 0.43
Foxf1Q61080 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Foxf1Q61080 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms