Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc6a4Q60857 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Slc6a4Q60857 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Slc6a4Q60857 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a4Q60857 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a4Q60857 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a4Q60857 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a4Q60857 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a4Q60857 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a4Q60857 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.97■■□□□ 1.11
Slc6a4Q60857 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a4Q60857 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc6a4Q60857 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.96■■□□□ 1.11
Slc6a4Q60857 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc6a4Q60857 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
Slc6a4Q60857 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.96■■□□□ 1.11
Slc6a4Q60857 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc6a4Q60857 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc6a4Q60857 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Slc6a4Q60857 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Slc6a4Q60857 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.95■■□□□ 1.1
Slc6a4Q60857 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Slc6a4Q60857 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.95■■□□□ 1.1
Slc6a4Q60857 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.94■■□□□ 1.1
Slc6a4Q60857 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Slc6a4Q60857 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc6a4Q60857 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc6a4Q60857 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a4Q60857 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a4Q60857 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.93■■□□□ 1.1
Slc6a4Q60857 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.93■■□□□ 1.1
Slc6a4Q60857 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.93■■□□□ 1.1
Slc6a4Q60857 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a4Q60857 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a4Q60857 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a4Q60857 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a4Q60857 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Slc6a4Q60857 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc6a4Q60857 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Slc6a4Q60857 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc6a4Q60857 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Slc6a4Q60857 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.91■■□□□ 1.1
Slc6a4Q60857 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc6a4Q60857 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.91■■□□□ 1.1
Slc6a4Q60857 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc6a4Q60857 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.9■■□□□ 1.1
Slc6a4Q60857 Gm40881-201ENSMUST00000223397 166 ntBASIC21.9■■□□□ 1.1
Slc6a4Q60857 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a4Q60857 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a4Q60857 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a4Q60857 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Slc6a4Q60857 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a4Q60857 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Slc6a4Q60857 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Slc6a4Q60857 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a4Q60857 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a4Q60857 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc6a4Q60857 Gm7417-201ENSMUST00000192950 473 ntBASIC21.88■■□□□ 1.09
Slc6a4Q60857 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.88■■□□□ 1.09
Slc6a4Q60857 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Slc6a4Q60857 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc6a4Q60857 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a4Q60857 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a4Q60857 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.87■■□□□ 1.09
Slc6a4Q60857 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a4Q60857 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a4Q60857 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a4Q60857 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a4Q60857 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a4Q60857 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Slc6a4Q60857 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a4Q60857 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc6a4Q60857 Gm10399-202ENSMUST00000202768 748 ntBASIC21.86■■□□□ 1.09
Slc6a4Q60857 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.86■■□□□ 1.09
Slc6a4Q60857 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc6a4Q60857 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a4Q60857 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.85■■□□□ 1.09
Slc6a4Q60857 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.85■■□□□ 1.09
Slc6a4Q60857 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a4Q60857 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.85■■□□□ 1.09
Slc6a4Q60857 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a4Q60857 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Slc6a4Q60857 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.84■■□□□ 1.09
Slc6a4Q60857 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a4Q60857 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a4Q60857 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a4Q60857 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Slc6a4Q60857 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc6a4Q60857 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slc6a4Q60857 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.83■■□□□ 1.08
Slc6a4Q60857 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slc6a4Q60857 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.82■■□□□ 1.08
Slc6a4Q60857 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a4Q60857 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms