Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Naf1Q3UMQ8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Naf1Q3UMQ8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Naf1Q3UMQ8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Naf1Q3UMQ8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Naf1Q3UMQ8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.69■■□□□ 1.06
Naf1Q3UMQ8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Naf1Q3UMQ8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Naf1Q3UMQ8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.68■■□□□ 1.06
Naf1Q3UMQ8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Naf1Q3UMQ8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Naf1Q3UMQ8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Naf1Q3UMQ8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Naf1Q3UMQ8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Naf1Q3UMQ8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Naf1Q3UMQ8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Naf1Q3UMQ8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Naf1Q3UMQ8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
Naf1Q3UMQ8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Naf1Q3UMQ8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Naf1Q3UMQ8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Naf1Q3UMQ8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Naf1Q3UMQ8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Naf1Q3UMQ8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Naf1Q3UMQ8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Naf1Q3UMQ8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Naf1Q3UMQ8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Naf1Q3UMQ8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.64■■□□□ 1.05
Naf1Q3UMQ8 Gm7417-201ENSMUST00000192950 473 ntBASIC21.64■■□□□ 1.05
Naf1Q3UMQ8 Gm40881-201ENSMUST00000223397 166 ntBASIC21.64■■□□□ 1.05
Naf1Q3UMQ8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Naf1Q3UMQ8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Naf1Q3UMQ8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Naf1Q3UMQ8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Naf1Q3UMQ8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Naf1Q3UMQ8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.63■■□□□ 1.05
Naf1Q3UMQ8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.63■■□□□ 1.05
Naf1Q3UMQ8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Naf1Q3UMQ8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Naf1Q3UMQ8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Naf1Q3UMQ8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Naf1Q3UMQ8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Naf1Q3UMQ8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Naf1Q3UMQ8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.61■■□□□ 1.05
Naf1Q3UMQ8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.61■■□□□ 1.05
Naf1Q3UMQ8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Naf1Q3UMQ8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Naf1Q3UMQ8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Naf1Q3UMQ8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Naf1Q3UMQ8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Naf1Q3UMQ8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Naf1Q3UMQ8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Naf1Q3UMQ8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Naf1Q3UMQ8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Naf1Q3UMQ8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Naf1Q3UMQ8 Gm10399-202ENSMUST00000202768 748 ntBASIC21.58■■□□□ 1.05
Naf1Q3UMQ8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Naf1Q3UMQ8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Naf1Q3UMQ8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Naf1Q3UMQ8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Naf1Q3UMQ8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.56■■□□□ 1.04
Naf1Q3UMQ8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms