Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg11Q3UHA3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Spg11Q3UHA3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.37■□□□□ 0.85
Spg11Q3UHA3 Gm26833-201ENSMUST00000180899 440 ntBASIC20.36■□□□□ 0.85
Spg11Q3UHA3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg11Q3UHA3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg11Q3UHA3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Spg11Q3UHA3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.36■□□□□ 0.85
Spg11Q3UHA3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Spg11Q3UHA3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spg11Q3UHA3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.35■□□□□ 0.85
Spg11Q3UHA3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Spg11Q3UHA3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spg11Q3UHA3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.34■□□□□ 0.85
Spg11Q3UHA3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Spg11Q3UHA3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Spg11Q3UHA3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
Spg11Q3UHA3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.33■□□□□ 0.84
Spg11Q3UHA3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Spg11Q3UHA3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg11Q3UHA3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.31■□□□□ 0.84
Spg11Q3UHA3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spg11Q3UHA3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Spg11Q3UHA3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Spg11Q3UHA3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Spg11Q3UHA3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.3■□□□□ 0.84
Spg11Q3UHA3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Spg11Q3UHA3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Spg11Q3UHA3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Spg11Q3UHA3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Spg11Q3UHA3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Spg11Q3UHA3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg11Q3UHA3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg11Q3UHA3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.29■□□□□ 0.84
Spg11Q3UHA3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.28■□□□□ 0.84
Spg11Q3UHA3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.28■□□□□ 0.84
Spg11Q3UHA3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg11Q3UHA3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Spg11Q3UHA3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.27■□□□□ 0.84
Spg11Q3UHA3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.27■□□□□ 0.84
Spg11Q3UHA3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Spg11Q3UHA3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Spg11Q3UHA3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg11Q3UHA3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg11Q3UHA3 Gm12251-201ENSMUST00000117893 792 ntBASIC20.26■□□□□ 0.83
Spg11Q3UHA3 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.26■□□□□ 0.83
Spg11Q3UHA3 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.26■□□□□ 0.83
Spg11Q3UHA3 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.26■□□□□ 0.83
Spg11Q3UHA3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Spg11Q3UHA3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spg11Q3UHA3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spg11Q3UHA3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Spg11Q3UHA3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spg11Q3UHA3 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.25■□□□□ 0.83
Spg11Q3UHA3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Spg11Q3UHA3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spg11Q3UHA3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg11Q3UHA3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg11Q3UHA3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.24■□□□□ 0.83
Spg11Q3UHA3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg11Q3UHA3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spg11Q3UHA3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Spg11Q3UHA3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg11Q3UHA3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Spg11Q3UHA3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg11Q3UHA3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spg11Q3UHA3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Spg11Q3UHA3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Spg11Q3UHA3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.22■□□□□ 0.83
Spg11Q3UHA3 Nespas-201ENSMUST00000143738 1083 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms