Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Lins1Q3U1D0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Lins1Q3U1D0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Lins1Q3U1D0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.55■■□□□ 1.68
Lins1Q3U1D0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Lins1Q3U1D0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lins1Q3U1D0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Lins1Q3U1D0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lins1Q3U1D0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.54■■□□□ 1.68
Lins1Q3U1D0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lins1Q3U1D0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Lins1Q3U1D0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Lins1Q3U1D0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Lins1Q3U1D0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Lins1Q3U1D0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Lins1Q3U1D0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Lins1Q3U1D0 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.52■■□□□ 1.68
Lins1Q3U1D0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lins1Q3U1D0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lins1Q3U1D0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Lins1Q3U1D0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.52■■□□□ 1.68
Lins1Q3U1D0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lins1Q3U1D0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lins1Q3U1D0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Lins1Q3U1D0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.52■■□□□ 1.68
Lins1Q3U1D0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Lins1Q3U1D0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.51■■□□□ 1.67
Lins1Q3U1D0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.51■■□□□ 1.67
Lins1Q3U1D0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Lins1Q3U1D0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Lins1Q3U1D0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Lins1Q3U1D0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Lins1Q3U1D0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Lins1Q3U1D0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Lins1Q3U1D0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Gm40881-201ENSMUST00000223397 166 ntBASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Lins1Q3U1D0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lins1Q3U1D0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Lins1Q3U1D0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Lins1Q3U1D0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Lins1Q3U1D0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Lins1Q3U1D0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.47■■□□□ 1.67
Lins1Q3U1D0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Lins1Q3U1D0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Lins1Q3U1D0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Lins1Q3U1D0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.46■■□□□ 1.67
Lins1Q3U1D0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lins1Q3U1D0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lins1Q3U1D0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lins1Q3U1D0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Lins1Q3U1D0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.45■■□□□ 1.66
Lins1Q3U1D0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lins1Q3U1D0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Lins1Q3U1D0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Lins1Q3U1D0 Gm22238-201ENSMUST00000175222 88 ntBASIC25.44■■□□□ 1.66
Lins1Q3U1D0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.44■■□□□ 1.66
Lins1Q3U1D0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Lins1Q3U1D0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lins1Q3U1D0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lins1Q3U1D0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lins1Q3U1D0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lins1Q3U1D0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lins1Q3U1D0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Lins1Q3U1D0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lins1Q3U1D0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lins1Q3U1D0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Lins1Q3U1D0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Lins1Q3U1D0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Lins1Q3U1D0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Lins1Q3U1D0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Lins1Q3U1D0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.4■■□□□ 1.66
Lins1Q3U1D0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.4■■□□□ 1.66
Lins1Q3U1D0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Lins1Q3U1D0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Lins1Q3U1D0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Lins1Q3U1D0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.4■■□□□ 1.66
Lins1Q3U1D0 Gm10399-202ENSMUST00000202768 748 ntBASIC25.4■■□□□ 1.66
Lins1Q3U1D0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Lins1Q3U1D0 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.4■■□□□ 1.66
Lins1Q3U1D0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.4■■□□□ 1.66
Lins1Q3U1D0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Lins1Q3U1D0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms