Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd8Q09XV5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.85■□□□□ 0.77
Chd8Q09XV5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chd8Q09XV5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chd8Q09XV5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Chd8Q09XV5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chd8Q09XV5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd8Q09XV5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd8Q09XV5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd8Q09XV5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.84■□□□□ 0.77
Chd8Q09XV5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chd8Q09XV5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.84■□□□□ 0.77
Chd8Q09XV5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chd8Q09XV5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd8Q09XV5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Chd8Q09XV5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd8Q09XV5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.83■□□□□ 0.77
Chd8Q09XV5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd8Q09XV5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd8Q09XV5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.83■□□□□ 0.76
Chd8Q09XV5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.83■□□□□ 0.76
Chd8Q09XV5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd8Q09XV5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.82■□□□□ 0.76
Chd8Q09XV5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.82■□□□□ 0.76
Chd8Q09XV5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.82■□□□□ 0.76
Chd8Q09XV5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd8Q09XV5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd8Q09XV5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chd8Q09XV5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd8Q09XV5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd8Q09XV5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd8Q09XV5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Chd8Q09XV5 Gm10033-202ENSMUST00000211874 928 ntBASIC19.8■□□□□ 0.76
Chd8Q09XV5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.8■□□□□ 0.76
Chd8Q09XV5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.79■□□□□ 0.76
Chd8Q09XV5 Gm7143-201ENSMUST00000222811 859 ntBASIC19.79■□□□□ 0.76
Chd8Q09XV5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd8Q09XV5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd8Q09XV5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd8Q09XV5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd8Q09XV5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd8Q09XV5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd8Q09XV5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chd8Q09XV5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd8Q09XV5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd8Q09XV5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chd8Q09XV5 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.78■□□□□ 0.76
Chd8Q09XV5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd8Q09XV5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd8Q09XV5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Chd8Q09XV5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Chd8Q09XV5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chd8Q09XV5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chd8Q09XV5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Chd8Q09XV5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd8Q09XV5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd8Q09XV5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Chd8Q09XV5 Gm18671-201ENSMUST00000214826 683 ntBASIC19.76■□□□□ 0.75
Chd8Q09XV5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd8Q09XV5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd8Q09XV5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.75■□□□□ 0.75
Chd8Q09XV5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chd8Q09XV5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Chd8Q09XV5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd8Q09XV5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd8Q09XV5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd8Q09XV5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.75■□□□□ 0.75
Chd8Q09XV5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.75■□□□□ 0.75
Chd8Q09XV5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chd8Q09XV5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd8Q09XV5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd8Q09XV5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd8Q09XV5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd8Q09XV5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chd8Q09XV5 Gm10653-202ENSMUST00000139570 835 ntBASIC19.74■□□□□ 0.75
Chd8Q09XV5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd8Q09XV5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.73■□□□□ 0.75
Chd8Q09XV5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd8Q09XV5 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.72■□□□□ 0.75
Chd8Q09XV5 Gm43060-201ENSMUST00000200621 289 ntBASIC19.72■□□□□ 0.75
Chd8Q09XV5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd8Q09XV5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Chd8Q09XV5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Chd8Q09XV5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.72■□□□□ 0.75
Chd8Q09XV5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Chd8Q09XV5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd8Q09XV5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd8Q09XV5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.71■□□□□ 0.75
Chd8Q09XV5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd8Q09XV5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd8Q09XV5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Chd8Q09XV5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd8Q09XV5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd8Q09XV5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.7■□□□□ 0.74
Chd8Q09XV5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd8Q09XV5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd8Q09XV5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chd8Q09XV5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd8Q09XV5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chd8Q09XV5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms