Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdkn2bP55271 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Cdkn2bP55271 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn2bP55271 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn2bP55271 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn2bP55271 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn2bP55271 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn2bP55271 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn2bP55271 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdkn2bP55271 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdkn2bP55271 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdkn2bP55271 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.45■□□□□ 0.86
Cdkn2bP55271 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdkn2bP55271 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdkn2bP55271 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdkn2bP55271 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdkn2bP55271 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdkn2bP55271 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.44■□□□□ 0.86
Cdkn2bP55271 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdkn2bP55271 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Cdkn2bP55271 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdkn2bP55271 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdkn2bP55271 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn2bP55271 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn2bP55271 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn2bP55271 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Cdkn2bP55271 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn2bP55271 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn2bP55271 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn2bP55271 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdkn2bP55271 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cdkn2bP55271 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdkn2bP55271 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cdkn2bP55271 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdkn2bP55271 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.42■□□□□ 0.86
Cdkn2bP55271 Scarna2-201ENSMUST00000157560 414 ntBASIC20.42■□□□□ 0.86
Cdkn2bP55271 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdkn2bP55271 Gm9806-201ENSMUST00000051080 552 ntBASIC20.42■□□□□ 0.86
Cdkn2bP55271 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdkn2bP55271 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn2bP55271 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn2bP55271 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.41■□□□□ 0.86
Cdkn2bP55271 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn2bP55271 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.41■□□□□ 0.86
Cdkn2bP55271 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn2bP55271 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn2bP55271 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdkn2bP55271 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkn2bP55271 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkn2bP55271 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkn2bP55271 Gm16437-201ENSMUST00000025669 507 ntBASIC20.4■□□□□ 0.86
Cdkn2bP55271 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkn2bP55271 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdkn2bP55271 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkn2bP55271 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkn2bP55271 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdkn2bP55271 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkn2bP55271 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.39■□□□□ 0.85
Cdkn2bP55271 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkn2bP55271 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdkn2bP55271 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkn2bP55271 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkn2bP55271 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdkn2bP55271 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.38■□□□□ 0.85
Cdkn2bP55271 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.38■□□□□ 0.85
Cdkn2bP55271 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.38■□□□□ 0.85
Cdkn2bP55271 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdkn2bP55271 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdkn2bP55271 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkn2bP55271 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkn2bP55271 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdkn2bP55271 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkn2bP55271 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkn2bP55271 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkn2bP55271 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Cdkn2bP55271 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdkn2bP55271 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdkn2bP55271 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdkn2bP55271 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdkn2bP55271 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms