Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.54■□□□□ 0.56
GdnfP48540 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.54■□□□□ 0.56
GdnfP48540 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GdnfP48540 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GdnfP48540 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GdnfP48540 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GdnfP48540 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GdnfP48540 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.53■□□□□ 0.56
GdnfP48540 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GdnfP48540 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GdnfP48540 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GdnfP48540 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
GdnfP48540 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.52■□□□□ 0.56
GdnfP48540 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GdnfP48540 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
GdnfP48540 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
GdnfP48540 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GdnfP48540 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.52■□□□□ 0.55
GdnfP48540 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GdnfP48540 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GdnfP48540 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GdnfP48540 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GdnfP48540 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
GdnfP48540 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.51■□□□□ 0.55
GdnfP48540 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.51■□□□□ 0.55
GdnfP48540 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GdnfP48540 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GdnfP48540 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GdnfP48540 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GdnfP48540 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.5■□□□□ 0.55
GdnfP48540 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.5■□□□□ 0.55
GdnfP48540 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GdnfP48540 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GdnfP48540 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GdnfP48540 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.49■□□□□ 0.55
GdnfP48540 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.49■□□□□ 0.55
GdnfP48540 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GdnfP48540 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GdnfP48540 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GdnfP48540 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
GdnfP48540 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GdnfP48540 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
GdnfP48540 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GdnfP48540 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GdnfP48540 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GdnfP48540 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GdnfP48540 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GdnfP48540 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GdnfP48540 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GdnfP48540 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GdnfP48540 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GdnfP48540 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
GdnfP48540 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
GdnfP48540 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.46■□□□□ 0.55
GdnfP48540 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GdnfP48540 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GdnfP48540 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GdnfP48540 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GdnfP48540 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GdnfP48540 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GdnfP48540 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GdnfP48540 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GdnfP48540 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
GdnfP48540 Gm27502-201ENSMUST00000183495 199 ntBASIC18.44■□□□□ 0.54
GdnfP48540 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GdnfP48540 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GdnfP48540 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.43■□□□□ 0.54
GdnfP48540 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GdnfP48540 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GdnfP48540 Gm22567-201ENSMUST00000175542 342 ntBASIC18.43■□□□□ 0.54
GdnfP48540 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GdnfP48540 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GdnfP48540 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GdnfP48540 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GdnfP48540 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GdnfP48540 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.42■□□□□ 0.54
GdnfP48540 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.42■□□□□ 0.54
GdnfP48540 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
GdnfP48540 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
GdnfP48540 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.42■□□□□ 0.54
GdnfP48540 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
GdnfP48540 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
GdnfP48540 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
GdnfP48540 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GdnfP48540 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GdnfP48540 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GdnfP48540 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
GdnfP48540 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GdnfP48540 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GdnfP48540 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms