Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hist1h1aP43275 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.46■□□□□ 0.39
Hist1h1aP43275 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hist1h1aP43275 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hist1h1aP43275 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.46■□□□□ 0.39
Hist1h1aP43275 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.46■□□□□ 0.39
Hist1h1aP43275 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hist1h1aP43275 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hist1h1aP43275 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hist1h1aP43275 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hist1h1aP43275 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hist1h1aP43275 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hist1h1aP43275 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hist1h1aP43275 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hist1h1aP43275 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hist1h1aP43275 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hist1h1aP43275 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hist1h1aP43275 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Gm44428-201ENSMUST00000204474 874 ntBASIC17.43■□□□□ 0.38
Hist1h1aP43275 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hist1h1aP43275 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hist1h1aP43275 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.42■□□□□ 0.38
Hist1h1aP43275 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hist1h1aP43275 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.42■□□□□ 0.38
Hist1h1aP43275 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hist1h1aP43275 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hist1h1aP43275 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Hist1h1aP43275 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hist1h1aP43275 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.41■□□□□ 0.38
Hist1h1aP43275 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hist1h1aP43275 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.4■□□□□ 0.38
Hist1h1aP43275 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hist1h1aP43275 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hist1h1aP43275 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hist1h1aP43275 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hist1h1aP43275 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
Hist1h1aP43275 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hist1h1aP43275 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.4■□□□□ 0.38
Hist1h1aP43275 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hist1h1aP43275 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hist1h1aP43275 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Hist1h1aP43275 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.39■□□□□ 0.38
Hist1h1aP43275 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Hist1h1aP43275 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hist1h1aP43275 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hist1h1aP43275 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h1aP43275 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hist1h1aP43275 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hist1h1aP43275 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1aP43275 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Scarna2-201ENSMUST00000157560 414 ntBASIC17.37■□□□□ 0.37
Hist1h1aP43275 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.37■□□□□ 0.37
Hist1h1aP43275 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hist1h1aP43275 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1aP43275 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1aP43275 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1aP43275 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.36■□□□□ 0.37
Hist1h1aP43275 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hist1h1aP43275 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.36■□□□□ 0.37
Hist1h1aP43275 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms